CSV Preview

[Meta]
TemplateVersion,v2.2
LastModifiedBy,Olivia Flynn
checksum,679ca7ce3dcaa5dc40982c9801a57c4c

[Header]
quote,SAGCQA2198-0
name,Nathan Rout-Pitt
institute,Adelaide Uni
date,2026-07-07

[Reads]
Read1_Cycles,150
Read2_Cycles,150
Barcode_Cycles,16
DualBarcode_Cycles,8
read1DarkCycles,None
read2DarkCycles,None
i7Len,8
i5Len,8
umiLen,8
umiSide,i7
i7MinHam,3
i5MinHam,3

[Other]
machine,T7
kit,polyA
bcKit,Tecan_384
service,
species,None
plate,A
flowcellID,E250192598
negativeControlsCount,1
lanes,F
extraParams,None

[Data]
Sample_ID,Sample_Name,Index_ID,index,index2
26-02501,WT_Untreated_1,Tecan_384_A-A1_CGCTACAT_AACCTACG,CGCTACAT,AACCTACG
26-02502,WT_Untreated_2,Tecan_384_A-B1_AATCCAGC_GCATCCTA,AATCCAGC,GCATCCTA
26-02503,WT_Untreated_3,Tecan_384_A-C1_CGTCTAAC_CAACGAGT,CGTCTAAC,CAACGAGT
26-02504,508_Untreated_1,Tecan_384_A-D1_AACTCGGA_TGCAAGAC,AACTCGGA,TGCAAGAC
26-02505,508_Untreated_2,Tecan_384_A-E1_GTCGAGAA_CTTACAGC,GTCGAGAA,CTTACAGC
26-02506,508_Untreated_3,Tecan_384_A-F1_ACAACAGC_ACCGACAA,ACAACAGC,ACCGACAA
26-02507,KO_Untreated_1,Tecan_384_A-G1_ATGACAGG_ACATGCCA,ATGACAGG,ACATGCCA
26-02508,KO_Untreated_2,Tecan_384_A-H1_GCACACAA_GAGCAATC,GCACACAA,GAGCAATC
26-02509,KO_Untreated_3,Tecan_384_A-A2_CTCCTAGT_CCTCATCT,CTCCTAGT,CCTCATCT
26-02510,WT_TGF_1,Tecan_384_A-B2_TCTTCGAC_TACTGCTC,TCTTCGAC,TACTGCTC
26-02511,WT_TGF_2,Tecan_384_A-C2_GACTACGA_TTACCGAC,GACTACGA,TTACCGAC
26-02512,WT_TGF_3,Tecan_384_A-D2_ACTCCTAC_CCGTAACT,ACTCCTAC,CCGTAACT
26-02513,508_TGF_1,Tecan_384_A-E2_CTTCCTTC_TTCCAGGT,CTTCCTTC,TTCCAGGT
26-02514,508_TGF_2,Tecan_384_A-F2_ACCATCCT_CCATGAAC,ACCATCCT,CCATGAAC
26-02515,508_TGF_3,Tecan_384_A-G2_CGTCCATT_TTCCTCCT,CGTCCATT,TTCCTCCT
26-02516,KO_TGF_1,Tecan_384_A-H2_AACTTGCC_CCAACTTC,AACTTGCC,CCAACTTC
26-02517,KO_TGF_2,Tecan_384_A-A3_GTACACCT_GAGACCAA,GTACACCT,GAGACCAA
26-02518,KO_TGF_3,Tecan_384_A-B3_ACGAGAAC_ACAGTTCG,ACGAGAAC,ACAGTTCG
26-02519,WT_LV-CFTR_1,Tecan_384_A-C3_CGACCTAA_CTAACCTG,CGACCTAA,CTAACCTG
26-02520,WT_LV-CFTR_2,Tecan_384_A-D3_TACATCGG_TCCGATCA,TACATCGG,TCCGATCA
26-02521,WT_LV-CFTR_3,Tecan_384_A-E3_ATCGTCTC_AGAAGGAC,ATCGTCTC,AGAAGGAC
26-02522,508_LV-CFTR_1,Tecan_384_A-F3_CCAACACT_GACGAACT,CCAACACT,GACGAACT
26-02523,508_LV-CFTR_2,Tecan_384_A-G3_TCTAGGAG_TTGCAACG,TCTAGGAG,TTGCAACG
26-02524,508_LV-CFTR_3,Tecan_384_A-H3_CTCGAACA_CCAACGAA,CTCGAACA,CCAACGAA
26-02525,KO_LV-CFTR_1,Tecan_384_A-A4_ACGGACTT_ATCGGAGA,ACGGACTT,ATCGGAGA
26-02526,KO_LV-CFTR_2,Tecan_384_A-B4_CTAAGACC_CCTAACAG,CTAAGACC,CCTAACAG
26-02527,KO_LV-CFTR_3,Tecan_384_A-C4_AACCGAAC_CATACTCG,AACCGAAC,CATACTCG
26-02528,WT_LV-CFTR_TGF_1,Tecan_384_A-D4_CCTTAGGT_TGCCTCAA,CCTTAGGT,TGCCTCAA
26-02529,WT_LV-CFTR_TGF_2,Tecan_384_A-E4_CCTATACC_TACAGAGC,CCTATACC,TACAGAGC
26-02530,WT_LV-CFTR_TGF_3,Tecan_384_A-F4_AACGCCTT_CGAGAGAA,AACGCCTT,CGAGAGAA
26-02531,508_LV-CFTR_TGF_1,Tecan_384_A-G4_TCCATTGC_AGGTAGGA,TCCATTGC,AGGTAGGA
26-02532,508_LV-CFTR_TGF_2,Tecan_384_A-H4_CAAGCCAA_GAACGAAG,CAAGCCAA,GAACGAAG
26-02533,508_LV-CFTR_TGF_3,Tecan_384_A-A5_AGGTTCCT_TCGAACCT,AGGTTCCT,TCGAACCT
26-02534,KO_LV-CFTR_TGF_1,Tecan_384_A-B5_GAACCTTC_CAAGGTAC,GAACCTTC,CAAGGTAC
26-02535,KO_LV-CFTR_TGF_2,Tecan_384_A-C5_AAGTCCTC_AGCTACCA,AAGTCCTC,AGCTACCA
26-02536,KO_LV-CFTR_TGF_3,Tecan_384_A-D5_CCACAACA_CATCCAAG,CCACAACA,CATCCAAG
26-02537,WT_LV-508CFTR_1,Tecan_384_A-E5_ATAACGCC_CTCACCAA,ATAACGCC,CTCACCAA
26-02538,WT_LV-508CFTR_2,Tecan_384_A-F5_CCGGAATA_TCAGTAGG,CCGGAATA,TCAGTAGG
26-02539,WT_LV-508CFTR_3,Tecan_384_A-G5_CCAAGTAG_GAACGTGA,CCAAGTAG,GAACGTGA
26-02540,508_LV-508CFTR_1,Tecan_384_A-H5_AAGGACCA_AGGAACAC,AAGGACCA,AGGAACAC
26-02541,508_LV-508CFTR_2,Tecan_384_A-A6_ACGCTTCT_CCTAAGTC,ACGCTTCT,CCTAAGTC
26-02542,508_LV-508CFTR_3,Tecan_384_A-B6_CTATCCAC_AACGCACA,CTATCCAC,AACGCACA
26-02543,KO_LV-508CFTR_1,Tecan_384_A-C6_TGACAACC_GTCAACAG,TGACAACC,GTCAACAG
26-02544,KO_LV-508CFTR_2,Tecan_384_A-D6_CAGTGCTT_ACACCTCA,CAGTGCTT,ACACCTCA
26-02545,KO_LV-508CFTR_3,Tecan_384_A-E6_TCACTCGA_TATGGCAC,TCACTCGA,TATGGCAC
26-02546,WT_LV-508CFTR_TGF_1,Tecan_384_A-F6_CTGACTAC_CGCAATGT,CTGACTAC,CGCAATGT
26-02547,WT_LV-508CFTR_TGF_2,Tecan_384_A-G6_GTGATCCA_ACTCAACG,GTGATCCA,ACTCAACG
26-02548,WT_LV-508CFTR_TGF_3,Tecan_384_A-H6_ACAGCAAG_GTCTGCAA,ACAGCAAG,GTCTGCAA
26-02549,508_LV-508CFTR_TGF_1,Tecan_384_A-A7_TGCTGTGA_CACGATTC,TGCTGTGA,CACGATTC
26-02550,508_LV-508CFTR_TGF_2,Tecan_384_A-B7_CAACACAG_AGAAGCCT,CAACACAG,AGAAGCCT
26-02551,508_LV-508CFTR_TGF_3,Tecan_384_A-C7_CCACATTG_TACTCCAG,CCACATTG,TACTCCAG
26-02552,KO_LV-508CFTR_TGF_1,Tecan_384_A-D7_TAGTGCCA_CGTCAAGA,TAGTGCCA,CGTCAAGA
26-02553,KO_LV-508CFTR_TGF_2,Tecan_384_A-E7_TCGTGCAT_CTGTACCA,TCGTGCAT,CTGTACCA
26-02554,KO_LV-508CFTR_TGF_3,Tecan_384_A-F7_CTACATCC_TCACCTAG,CTACATCC,TCACCTAG
26-02555,WT_LV-EV_1,Tecan_384_A-G7_CATACGGA_AACACCAC,CATACGGA,AACACCAC
26-02556,WT_LV-EV_2,Tecan_384_A-H7_TGCGTAAC_CGTCTTCA,TGCGTAAC,CGTCTTCA
26-02557,WT_LV-EV_3,Tecan_384_A-A8_CAGGTTCA_AACGTAGC,CAGGTTCA,AACGTAGC
26-02558,508_LV-EV_1,Tecan_384_A-B8_AGAACCAG_GCAACCAT,AGAACCAG,GCAACCAT
26-02559,508_LV-EV_2,Tecan_384_A-C8_GAATGGCA_GATCCACT,GAATGGCA,GATCCACT
26-02560,508_LV-EV_3,Tecan_384_A-D8_AGGCAATG_ACCTAGAC,AGGCAATG,ACCTAGAC
26-02561,KO_LV-EV_1,Tecan_384_A-E8_TAGGAGCT_CTAGCAGT,TAGGAGCT,CTAGCAGT
26-02562,KO_LV-EV_2,Tecan_384_A-F8_CGAACAAC_TCGATGAC,CGAACAAC,TCGATGAC
26-02563,KO_LV-EV_3,Tecan_384_A-G8_CATTCGTC_TTGGTGCA,CATTCGTC,TTGGTGCA
26-02564,WT_Untreatedb_1,Tecan_384_A-H8_AGCCAACT_AGTGCATC,AGCCAACT,AGTGCATC
26-02565,WT_Untreatedb_2,Tecan_384_A-A9_GCCTTAAC_CCGTTATG,GCCTTAAC,CCGTTATG
26-02566,WT_Untreatedb_3,Tecan_384_A-B9_ATTCCGCT_TGTCGACT,ATTCCGCT,TGTCGACT
26-02567,WT_DMSO_1,Tecan_384_A-C9_ATCGTGGT_CTCTATCG,ATCGTGGT,CTCTATCG
26-02568,WT_DMSO_2,Tecan_384_A-D9_GCTACAAC_ACTGCTTG,GCTACAAC,ACTGCTTG
26-02569,WT_DMSO_3,Tecan_384_A-E9_TCTACGCA_CGCCTTAT,TCTACGCA,CGCCTTAT
26-02570,WT_TGFb_1,Tecan_384_A-F9_CTCCAATC_ATAGGTCC,CTCCAATC,ATAGGTCC
26-02571,WT_TGFb_2,Tecan_384_A-G9_ACTCTCCA_TGATCACG,ACTCTCCA,TGATCACG
26-02572,WT_TGFb_3,Tecan_384_A-H9_GTCTCATC_CGGATCAA,GTCTCATC,CGGATCAA
26-02573,WT_TGF_DMSO_1,Tecan_384_A-A10_GCCAGAAT_TACTAGCG,GCCAGAAT,TACTAGCG
26-02574,WT_TGF_DMSO_2,Tecan_384_A-B10_AATGACGC_TGGACCAT,AATGACGC,TGGACCAT
26-02575,WT_TGF_DMSO_3,Tecan_384_A-C10_GTACCACA_GCGCATAT,GTACCACA,GCGCATAT
26-02576,SAGC_neg,Tecan_384_A-D10_ACGATCAG_ATCGCAAC,ACGATCAG,ATCGCAAC